論文

査読有り
2014年7月

Improved Method for Drawing of a Glycan Map, and the First Page of Glycan Atlas, Which Is a Compilation of Glycan Maps for a Whole Organism

PLOS ONE
  • Shunji Natsuka
  • ,
  • Mayumi Masuda
  • ,
  • Wataru Sumiyoshi
  • ,
  • Shin-ichi Nakakita

9
7
開始ページ
e102219
終了ページ
記述言語
英語
掲載種別
研究論文(学術雑誌)
DOI
10.1371/journal.pone.0102219
出版者・発行元
PUBLIC LIBRARY SCIENCE

Glycan Atlas is a set of glycan maps over the whole body of an organism. The glycan map that includes data of glycan structure and quantity displays micro-heterogeneity of the glycans in a tissue, an organ, or cells. The two-dimensional glycan mapping is widely used for structure analysis of N-linked oligosaccharides on glycoproteins. In this study we developed a comprehensive method for the mapping of both N- and O-glycans with and without sialic acid. The mapping data of 150 standard pyridylaminated glycans were collected. The empirical additivity rule which was proposed in former reports was able to adapt for this extended glycan map. The adapted rule is that the elution time of pyridylamino glycans on high performance liquid chromatography (HPLC) is expected to be the simple sum of the partial elution times assigned to each monosaccharide residue. The comprehensive mapping method developed in this study is a powerful tool for describing the micro-heterogeneity of the glycans. Furthermore, we prepared 42 pyridylamino (PA-) glycans from human serum and were able to draw the map of human serum N- and O-glycans as an initial step of Glycan Atlas editing.

リンク情報
DOI
https://doi.org/10.1371/journal.pone.0102219
PubMed
https://www.ncbi.nlm.nih.gov/pubmed/25006806
Web of Science
https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=JSTA_CEL&SrcApp=J_Gate_JST&DestLinkType=FullRecord&KeyUT=WOS:000339040600106&DestApp=WOS_CPL
ID情報
  • DOI : 10.1371/journal.pone.0102219
  • ISSN : 1932-6203
  • PubMed ID : 25006806
  • Web of Science ID : WOS:000339040600106

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